Publikationen
Arbeitsgruppe Mikrobiologie
Georgiev, N.FK., Andersson, A.L., Ruppe, Z., Kattwinkel, L., Frankenberg-Dinkel, N. (2025) Archaeal Signalling Networks—New Insights Into the Structure and Function of Histidine Kinases and Response Regulators of the Methanogenic Archaeon Methanosarcina acetivorans. Environmental Microbbiology
Zayed, A., Ledermann, B., Fischöder, T., Elling, L., Frankenberg-Dinkel, N., Ulber, R.(2025) Heterologous expression of algal fucosyltransferases and sulfotransferases in Escherichia coli. Biochemical Engineering Journal
Zegri, F., Schmidt, T., Misumi, Y., Miyanoiri, Y., Frankenberg-Dinkel, N., Kurisu, G., Hofmann, E.(2025) Understanding PebS–Ferredoxin Recognition: A Structural Perspective on Viral and Host Redox Partners. bioRxiv
Huber, C., Strack, M., Diller, R., Frankenberg-Dinkel, N.(2025) Analyzing In Vitro Autokinase Activity of Microbial Phytochromes Under Well-Defined Light Conditions. Phytochromes: Methods and Protocols
Martin, A.N., Stüeken, E.E., Gehringer, M.M., Markowska, M., Vonhof, H., Weyer, S., Hofmann, H.(2025) Anomalous δ15N values in the Neoarchean associated with hydrothermal ammonium upwelling. Nat Commun 16, 187
Baidya, A.S., Gehringer, M.M., Savaniu, C., Heubeck, Stüeken, E.E.(2025) Magmatic and thermally produced reactive phosphorus 3.2 billion years ago and its implications for early life. Communications earth and enviroment IF
Heck, S., Sommer, F., Zehner, S., Schroda, M., Gehringer, M.M., Frankenberg-Dinkel, N.(2024) Expanding the toolbox for phycobiliprotein assembly: phycoerythrobilin biosynthesis in Synechocystis. Physiologia Plantarum 176 (1), e14137
Huber, C., Strack, M., Schultheiss, I., Pielage, J., Mechler, X., Hornbogen, J., Diller, R., Frankenberg-Dinkel, N.(2024) Darkness inhibits autokinase activity of bacterial bathy phytochromes. Journal of Biological Chemistry 300(4) 107148
Wegner, H., Roitman, S., Kupczok, A., Braun, V., Woodhouse, J.N., Grossart, H-P., Zehner, S., Béjà, O., Frankenberg-Dinkel, N.(2024) Identification of Shemin pathway genes for tetrapyrrole biosynthesis in bacteriophage sequences from aquatic environments. Nature Comminications 15 (1), 8783
Tamanna, S.S., Boden J.S., Kaiser, K.M., Wannike, N., Höring, J., Sánchez-Baracaldo, P., Deponte, M., Frankenberg-Dinkel, N., Gehringer, M.M.(2024) Early‐Branching Cyanobacteria Grow Faster and Upregulate Superoxide Dismutase Activity Under a Simulated Early Earth Anoxic Atmosphere. Geobiolgy 22 (6), e70005
Wannicke, N., Stueken, E.E., Bauersachs, T., Gehringer, M.M.(2024) Exploring the influence of atmospheric CO2 and O2 levels on the utility of nitrogen isotopes as proxy for biological N2 fixation. Applied and Environmental Microbiology 90 (10), e00574-24
Martin, A.N., Stüeken, E.E., Leitner, J., Gehringer, M.M., Markowska, M., Weyer, S., Vonhof, H., Hofmann, A. (2024)Neoarchean nitrogen isotope variability associated with the upwelling of hydrothermal ammonium on the submerged Zimbabwe proto-craton.
Buston-Diaz, E.D., Cruz-Perez, A., Garfias-Gallegos, D., D'Agostino, P.M., Gehringer, M.M., Cibrian-Jaramillo, A., Barona-Gomez, F. (2024) Phylometagenomics of cycad coralloid roots reveals shared symbiotic signals. Microbial Genomics 10 (3), 001207
Martin, A.N., Stüeken, E.E., Michaud, JA-S., Münker, C., Weyer, S., van Hees, E. HP., Gehringer, M.M.(2024) Mechanisms of nitrogen isotope fractionation at an ancient black smoker in the 2.7 Ga Abitibi greenstone belt, Canada. Geology Society of America52 (3), 181-186
Frascogna, F., Ledermann, B., Hartmann, J., Patallo, E.P., Zeqiri, F., Hofmann, E. Frankenberg-Dinkel, N.(2023) On the evolution of the plant phytochrome chromophore biosynthesis. Plant Physiol.
Scherhag, A., Räschle, M., Unbehend, N., Venn, B., Glueck, D., Mühlhaus, T., Keller, S., Patallo, E.P., Zehner, S. & Frankenberg-Dinkel, N. (2023) Characterization of a soluble library of the Pseudomonas aeruginosa PAO1 membrane proteome with emphasis on c-di-GMP turnover enzymes. µLife
Robinson EA., Frankenberg-Dinkel N., Xue F., Wilks A. (2021) Recombinant Production of Biliverdin IXβ and δ Isomers in the T7 Promoter Compatible Escherichia coli Nissle. Frontiers in microbiology 12, 787609-787609
Tomazic, N., Overkamp, K., Wegner, H., Gu, B., Mahler, F., Aras, M., Keller, S., Pierik, A.J., Hofmann, E. & Frankenberg-Dinkel, N. (2021) Exchange of a single amino acid residue in the cryptophyte phycobiliprotein lyase GtCPES expands its substrate specificity. Biochim. Biophys. Acta-Bioenergetics
Streng, C., Hartmann, J., Leister, K., Krauß, N., Lamparter, T., Frankenberg-Dinkel, N., Yu, Z. & Fischer,R.(2021) A novel role for mitochondria in fungal light sensing. EMBO J. e108083
Herrmann A.J., Sorwat J., Byrne J.M., Frankenberg-Dinkel, & Gehringer M.M. (2021) Evidence for diurnal Fe(II)/Fe(III) cycling and enhanced O2 production during the Archean in a simulated marine oxygen oases. Nature Comm. 12, 2069
Krauspe,V., Fahrner,M., Spät, P., Steglich,C., Frankenberg-Dinkel, N., Macek, B., Schilling, O. & Hess, W.R.(2021) Discovery of a novel small protein factor involved in the coordinated degradation of phycobilisomes in cyanobacteria. Proc Natl Acad Sci USA 118 (5): e2012277118
Herrmann AJ., Gehringer MM. (2021) A low-cost automized anaerobic chamber for long-term growth experiments and sample handling. HardwareX 10, e00237
Köhler I., Martinez RE., Piatka D., Herrmann AJ., Gallo A., Gehringer MM., Barth JAC. (2021) How are oxygen budgets influenced by dissolved iron and growth of oxygenic phototrophs in an iron-rich spring system? Initial results from the Espan Spring in Fürth, Germany. Biogeosciences 18 (15), 4535-4548
Wannicke N., Herrmann AJ., Gehringer MM. (2021) Atmospheric CO 2 availability induces varying responses in net photosynthesis, toxin production and N 2 fixation. Aquatic Sciences 83 (2), 1-17
Fiege, K. & Frankenberg-Dinkel, N. (2020) Construction of a new T7 promoter compatible Escherichia coli Nissle 1917 strain for recombinant production of heme-dependent proteins. Microb Cell Fact. 19, 1-7.
Aras, M., Hartmann, V., Hartmann, J., Nowaczyk, M. & Frankenberg-Dinkel, N. (2020) Proximity channeling during cyanobacterial phycoerythrobilin synthesis. FEBS J. 287, 284-294.
Fiege, K., Twittenhoff, C., Kwiatowski, K. and Frankenberg-Dinkel, N. (2019) Spectroscopic characterization of the heme binding (GAF) domain of two sensor kinases from Methanosarcina acetivorans. J. Porphyr. Phthalocyanines. 23(7), 930-942.
Aras, M., Hartmann, V., Hartmann, J., Nowaczyk, MM. and Frankenberg-Dinkel, N. (2019) Proximity channeling during cyanobacterial phycoerythrobilin synthesis. FEBS Journal (Epub ahaed of print).
Fiege, K. and Frankenberg-Dinkel, N. (2019) Thiol-based redox sensing in the methyltransferase associated sensor kinase RdmS in Methanosarcina acetivorans. Environ. Microbiol. 21(5),1597-1610.
Bedrunka, P., Olbrisch, F., Rüger, M., Zehner, S. and Frankenberg-Dinkel, N. (2018) Nitric oxide controls c-di-GMP turnover in Dinoroseobacter shibae. Microbiol.164(11), 1405-1415
Fiege, K., Querebillo, C. J., Hildebrandt, P. and Frankenberg-Dinkel, N. (2018) Improved Method for the Incorporation of Heme Cofactors into Recombinant Proteins Using Escherichia coli Nissle 1917. Biochem.57(19), 2747-2755.
Stiefelmaier, J., Ledermann, B., Sorg, M., Banek, A., Geib, D., Ulber, R. and Frankenberg-Dinkel, N. (2018) Pink bacteria - Production of the pink chromophore phycoerythrobilin with Escherichia coli. J. Biotechnol. 274, 47-53.
Ledermann, B., Schwan, M., Sommerkamp, J.A., Hofmann, E., Béjà, O. and Frankenberg-Dinkel, N. (2018) Evolution and molecularmechanism of four-electronreducingferredoxin-dependentbilinreductases from oceanicphages. FEBS Journal 285(2), 339-356.
Velázquez, F., Buhrke, D., Michael, N., Sauthof, L., Wilkening, S., Tavraz, N.N. , Salewski, J., Frankenberg-Dinkel, N., Mroginski, M.A., Scheerer, P., Friedrich, T., Siebert, F. and Hildebrandt, P.(2017) Common structural elements in the chromophore binding pocket of the Pfr state of bathy phytochromes. Photochem. Photobiol. 93(3), 724-732.
Gasper, R., Schwach, J., Hartmann, J., Holtkamp, A., Wiethaus, J., Riedel, N., Hofmann, E. and Frankenberg-Dinkel, N. (2017) Auxiliary metabolic genes- Distinct Features of Cyanophage-encoded T-type Phycobiliprotein Lyase θCpeT J. Biol. Chem. 292(8), 3089-3098.